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93. R. Cao, Y. Li, X. Chen, X. Ge, M. Li, M. Guan, Y. Hou, Y. Fu, X. Xu, S. Jiang, B. Gao, P. Xi*, Open-3DSIM: an Open-source three-dimensional structured illumination microscopy reconstruction platform, Nature Methods 20, 1183-1186 (2023).
92. Chen X, Zhong S, Hou Y, Cao R, Wang W, Li D, Dai Q, Kim D, Xi P*. Superresolution structured illumination microscopy reconstruction algorithms: a review. Light: Science & Applications. 2023 Jul 12;12(1):172.
86. Kun Zhao, Xinzhu Xu, Dayong Jin, Peng Xi*, Two-photon MINFLUX with doubled localization precision, eLight 2:5 (2022). 


80. Jiamin Wu, Zhi Lu, Dong Jiang, Yuduo Guo, Hui Qiao, Yi Zhang, Tianyi Zhu, Yeyi Cai, Xu Zhang, Karl Zhanghao, Hao Xie, Tao Yan, Guoxun Zhang, Xiaoxu Li, Zheng Jiang, Xing Lin, Lu Fang, Bing Zhou, Peng Xi, Jingtao Fan*, Li Yu*, Qionghai Dai*, Iterative tomography with digital adaptive optics permits hour-long intravital observation of 3D subcellular dynamics at millisecond scale, Cell doi: 10.1016/j.cell.2021.04.029 (2021)
79. Wu, Zhaoyang, Xinzhu Xu, and Peng Xi*. "Stimulated emission depletion microscopy for biological imaging in four dimensions: A review." Microscopy Research and Technique (2021).
78. Man, Z., Cui, H., Lv, Z., Xu, Z.*, Wu, Z., Wu, Y., Liao, Q., Liu, M., Xi, P.*, Zheng, L.* and Fu, H.*, 2021. Organic Nanoparticles-Assisted Low-Power STED Nanoscopy. Nano Letters 21(8), 3487–3494 (2021)
77. Y. Liu, Z. Zhou, F. Wang, G. Kewes, S. Wen, S. Burger, ME Wakiani, P. Xi, J. Yang, X. Yang, O. Benson*, D. Jin, Axial localization and tracking of self-interference nanoparticles by lateral point spread functions. Nature Communications 12(1), 1-9 (2021).


72. Jiang, S., Guan, M., Wu, J., Fang, G., Xu, X., Jin, D., Liu, Z., Shi, K., Bai, F., Wang, S. and Xi, P.*, 2020. Frequency-domain diagonal extension imaging. Advanced Photonics, 2(3), p.036005.

71. Li, M., Li, Y., Liu, W., Lal, A., Jiang, S., Jin, D., ... & Xi, P.. Structured illumination microscopy using digital micro-mirror device and coherent light source. Applied Physics Letters, 116(23), 233702 (2020). Highlighted by SciLight.


64. L. Chen, M. Wang, X. Zhang, M. Zhang, Y. Hu, Z. Shi, P. Xi, and J. Gao, “Group-sparsity-based super-resolution dipole orientation mapping (GS-SDOM),” IEEE Transactions on medical imaging 38,2687-2694 (2019).
63. K. Zhanghao, X. Chen, M. Li, Y. Liu, W. Liu, S. Luo, X. Wang, K. Zhao, A. Lai, C. Shan, H. Xie, Y. Zhang, X. Li, Q. Dai, and P. Xi, “Super-resolution Imaging of Fluorescent Dipoles by Polarized Structured Illumination Microscopy,” Nature Communications 10, 4694 (2019).


61. M. Wang, M. Chen, K.  Zhanghao, X. Zhang, Z. Jing, J. Gao, P. Xi*, Z. Dai*, Q. Dai*, Polarization-based super-resolution imaging of surface-enhanced raman scattering nanoparticles with orientational information. Nanoscale 10, 19757-19765 (2018)

58. A. Lal, C. Shan, K. Zhao, W. Liu, X. Huang, W. Zong, L. Chen, P. Xi*, A frequency domain SIM reconstruction algorithm using reduced number of images. IEEE Transactions on Image Processing 27(9), 4555-4570 (2018).

56. D. Jin*, P. Xi*, B. Wang, L. Zhang, J. Enderlein*, A. M. Oijen*, “Nanoparticles for super-resolution microscopy and single-molecule tracking”, Nature Methods, 15, 415-423 (2018).


52. Y. Liu, Y. Lu*, X. Yang, X. Zheng, S. Wen, F. Wang, X. Vidal, T. Zhao, D. Liu, Z. Zhou, C. Ma, J. Zhou, J. Piper, P. Xi*, and D. Jin*, “Amplified stimulated emission in upconversion nanoparticles for super resolution nanoscopy,” Nature 543, 229–233 (2017).


50. K. Zhanghao, L. Chen, X. Yang, M. Wang, Z. Jing, H. Han, M. Q. Zhang, D. Jin*, J. Gao*, P. Xi*, “Super-resolution dipole orientation mapping via polarization demodulation”, Light: Science and Applications (2016). [2015 Impact factor:14.603]

This paper has been highlighted by Nature Methods.

48. X. Yang, K. Zhanghao, H. Wang, Y. Liu, F. Wang, X. Zhang, K. Shi, J. Gao, D. Jin, P. Xi*, “Versatile application of fluorescent quantum dot labels in super-resolution fluorescence microscopy”, ACS Photonics, doi: 10.1021/acsphotonics.6b00178 (2016).

46. X. Yang, H. Xie, E. Alonas, Y. Liu, X. Chen, Q. Ren, P. J. Santangelo, P. Xi*, and D. Jin, “Mirror enhanced axial narrowing super-resolution microscopy”, Light: Science and Applications doi:10.1038/lsa.2016.134 (2016). [2015 Impact factor:14.603]

This paper has been highlighted by Nature Photonics.

44. A. Lal, C. Shan, P. Xi*, “Structured illumination microscopy image reconstruction algorithm”, IEEE Journal of Selected Topics in Quantum Electronics, doi: 10.1109/JSTQE.2016.2521542 (2016) [2016 Impact factor: 3.971]

43. X. Chen, M. Wei, M. M. Zheng, J. Zhao, H. Hao, L. Chang, P. Xi, Y. Sun, “Study of RNA Polymerase II Clustering inside Live-Cell Nuclei Using Bayesian Nanoscopy”, ACS Nano 10 (2), pp 2447–2454 (2016) [2015 Impact factor: 12.881]



41. W. Yu, Z. Ji, D. Dong, X. Yang, Y. Xiao, Q. Gong, P. Xi*, K. Shi*, “Super-resolution deep imaging with hollow Bessel beam STED microscopy”, Laser Photonics Reviews (2015) doi: 10.1002/lpor.201500151 [2014 Impact factor: 8.008].

40. X. Zhang, X. Chen, Z. Zeng, M. Zhang, Y. Sun, P. Xi*, J. Peng*, and P. Xu*, “Development of a reversibly switchable protein for super-resolution optical fluctuation imaging”, ACS Nano, 9(3) 2659-2667 (2015). [2014 Impact factor: 12.033]

39. X. Chen, Z. Zeng, H. Wang, and P. Xi*, "Three dimensional multimodal sub-diffraction imaging with spinning-disk confocal microscopy using blinking/fluctuation probes," Nano Research, doi: 10.1007/s12274-015-0736-8 (2015). [2014 Impact factor 7.08]

​A full list of all the journal papers can be found here.

Representative Publications


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